RNA-Seq of Lysobacter capsici AZ78 - SRA

SRX10344531: RNA-Seq of Lysobacter capsici AZ78
1 ILLUMINA (Illumina HiSeq 4000) run: 16M spots, 4.8G bases, 1.6Gb downloads

Design: TruSeq Stranded mRNA Library Prep protocol with rRNA depletion was performed using the Ribo-Zero rRNA Removal Kits (Bacteria)

Submitted by: University of Trento

Study: Transcriptomic analysis of Lysobacter capsici AZ78 in response to diffusible communication signals

PRJNA714393 • SRP310710 • All experiments • All runs

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Transcriptome analysis on the plant beneficial bacterium Lysobacter capsici AZ78 in response to 13-methyltetradecanoic acid (LeDSF3), indole (IND), glyoxylic acid (GLY), 2,3-butanedione (BUT), 3-hydroxybenzoic acid (3HBA), 4-hydroxybenzoic acid (4HBA) and mix of N-acyl homoserine lactones (AHL)

Sample: Lysobacter capsici AZ78_IND_Rep 1

SAMN18306547 • SRS8463647 • All experiments • All runs

Organism: Lysobacter capsici

Library:

Name: Lysobacter capsici AZ78_IND_Rep 1

Instrument: Illumina HiSeq 4000

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: RANDOM

Layout: PAIRED

Runs: 1 run, 16M spots, 4.8G bases, 1.6Gb

Run	# of Spots	# of Bases	Size	Published
SRR13966599	16,018,444	4.8G	1.6Gb	2021-08-14

ID:: 13537333

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